European football's governing body said the message "Glory to our Heroes", a rallying cry during the 2014 anti-Russia protests in Ukraine that is featured inside the shirt, was "clearly political in nature" and therefore would have to be removed.
On Tuesday, Russia had sent a letter of complaint to UEFA over the yellow jersey which also features on the front the outline of Ukraine including Crimea, which was annexed by Russia in 2014.
The jersey had been paraded by Ukrainian President Volodymyr Zelensky, who was quick to back the shirt after news of Russia's letter broke.
Comedian-turned-president Zelensky posted pictures on two photographs on Instagram of himself holding a jersey and said it bore "many important symbols that unify the Ukrainian people". The presidential press service then released a selfie Zelensky took of himself wearing the jersey.